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NAR Web Server Issue 2006

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FISH--family identification of sequence homologues using structure anchored hidden Markov models.

Jeanette Tångrot et al.

Nucleic acids research. 34 (Web Server issue), W10-4 (01 Jul 2006)

info:pmid/16844969 | info:doi/10.1093/nar/gkl330

10.1093/nar/gkl330

Posted by yamagatm and 2 others to Protein Bioinformatics web Domain tool server NAR Web Server Issue 2006 on Sat Aug 05 2006 at 13:05 UTC | info | related

TreeDomViewer: a tool for the visualization of phylogeny and protein domain structure.

Blaise T F Alako et al.

Nucleic acids research. 34 (Web Server issue), W104-9 (01 Jul 2006)

info:pmid/16844970 | info:doi/10.1093/nar/gkl171

10.1093/nar/gkl171

Posted by yamagatm and 2 others to phylogeny Protein Bioinformatics web Domain visualization tool server MSA NAR Web Server Issue 2006 on Sat Aug 05 2006 at 13:05 UTC | info | related

PROFEAT: a web server for computing structural and physicochemical features of proteins and peptides from amino acid sequence.

Z R Li et al.

Nucleic acids research. 34 (Web Server issue), W32-7 (01 Jul 2006)

info:pmid/16845018 | info:doi/10.1093/nar/gkl305

10.1093/nar/gkl305

Posted by yamagatm and 3 others to sequence Bioinformatics web analysis tool server NAR Web Server Issue 2006 on Sat Aug 05 2006 at 13:05 UTC | info | related

The MPI Bioinformatics Toolkit for protein sequence analysis.

Andreas Biegert et al.

Nucleic acids research. 34 (Web Server issue), W335-9 (01 Jul 2006)

info:pmid/16845021 | info:doi/10.1093/nar/gkl217

10.1093/nar/gkl217

Posted by yamagatm and 2 others to sequence Bioinformatics web analysis tool server package NAR Web Server Issue 2006 on Sat Aug 05 2006 at 13:05 UTC | info | related

EGassembler: online bioinformatics service for large-scale processing, clustering and assembling ESTs and genomic DNA fragments.

Ali Masoudi-Nejad et al.

Nucleic acids research. 34 (Web Server issue), W459-62 (01 Jul 2006)

info:pmid/16845049 | info:doi/10.1093/nar/gkl066

10.1093/nar/gkl066

Posted by yamagatm and 2 others to annotation Bioinformatics est web clustering tool server NAR Web Server Issue 2006 on Sat Aug 05 2006 at 13:05 UTC | info | related

BiologicalNetworks: visualization and analysis tool for systems biology.

Michael Baitaluk et al.

Nucleic acids research. 34 (Web Server issue), W466-71 (01 Jul 2006)

info:pmid/16845051 | info:doi/10.1093/nar/gkl308

10.1093/nar/gkl308

Posted by yamagatm and 4 others to systems biology network Bioinformatics web visualization tool server NAR Web Server Issue 2006 on Sat Aug 05 2006 at 13:05 UTC | info | related

BABELOMICS: a systems biology perspective in the functional annotation of genome-scale experiments.

Fátima Al-Shahrour et al.

Nucleic acids research. 34 (Web Server issue), W472-6 (01 Jul 2006)

info:pmid/16845052 | info:doi/10.1093/nar/gkl172

10.1093/nar/gkl172

Posted by yamagatm and 3 others to genomics Bioinformatics web tool server package NAR Web Server Issue 2006 on Sat Aug 05 2006 at 13:05 UTC | info | related

http://www.ncbi.nlm.nih.gov/BLAST/

BLAST improvements for better sequence analysis

Jian Ye, Scott McGinnis, and Thomas L Madden

Nucleic acids research. 34 (Web Server issue), W6-9 (01 Jul 2006)

info:pmid/16845079 | info:doi/10.1093/nar/gkl164

10.1093/nar/gkl164

Posted by yamagatm and 3 others to Bioinformatics web Blast NCBI tool server NAR Web Server Issue 2006 on Sat Aug 05 2006 at 13:05 UTC | info | related

PROTOGENE: turning amino acid alignments into bona fide CDS nucleotide alignments.

Sébastien Moretti et al.

Nucleic acids research. 34 (Web Server issue), W600-3 (01 Jul 2006)

info:pmid/16845080 | info:doi/10.1093/nar/gkl170

10.1093/nar/gkl170

Posted by yamagatm and 4 others to sequence Bioinformatics web Blast tool server Alignment MSA NAR Web Server Issue 2006 on Sat Aug 05 2006 at 13:05 UTC | info | related

PAL2NAL: robust conversion of protein sequence alignments into the corresponding codon alignments.

Mikita Suyama, David Torrents, and Peer Bork

Nucleic acids research. 34 (Web Server issue), W609-12 (01 Jul 2006)

info:pmid/16845082 | info:doi/10.1093/nar/gkl315

10.1093/nar/gkl315

Posted by yamagatm and 5 others to sequence Protein Bioinformatics web Codon tool server Alignment MSA NAR Web Server Issue 2006 on Sat Aug 05 2006 at 13:05 UTC | info | related

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