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Genome Biology | Full text | Comparative genomic analysis of fungal genomes reveals intron rich ancestors
Posted by stajich (who is an author) and 1 other to evolution fungi intron on Sun Dec 16 2007 at 00:57 UTC | info | related
 
An intron with a constitutive transport element is retained in a Tap messenger RNA
Ying Li et al.
Nature 443 (7108), 234-7 (14 Sep 2006)
info:doi/10.1038/nature05107
Posted by stajich and 1 other to transport unspliced nuclear export splicing intron on Sat Sep 16 2006 at 10:37 UTC | info | related
 
Intron evolution: Miklós Csürös
www.iro.umontreal.ca
Method for intron rates of gain and loss estimation - see also Nguyen
Posted by stajich to intron on Sat Aug 12 2006 at 23:30 UTC | info | related
 
New Maximum Likelihood Estimators for Eukaryotic Intron Evolution
Hung D. Nguyen, Maki Yoshihama, and Naoya Kenmochi
PLoS Computational Biology 1 (7), e79 (01 Dec 2005)
info:doi/10.1371/journal.pcbi.0010079
a new method (see Csuros paper as well) for intron density estimation
Posted by stajich to intron on Sat Aug 12 2006 at 23:29 UTC | info | related
 
On the Estimation of Intron Evolution
Miklós Csűrös
PLoS Computational Biology 2 (7), e84 (01 Jul 2006)
info:doi/10.1371/journal.pcbi.0020084
a letter about a method of intron density estimation and reconstruction that was previously published
Posted by stajich to intron on Sat Aug 12 2006 at 23:28 UTC | info | related
 
Patterns of intron gain and loss in fungi.
biology.plosjournals.org
intron loss and gain in set of 4 fungi
Posted by stajich with 1 comment to fungal genome intron on Sat Aug 12 2006 at 23:27 UTC | info | related
 
From the Cover: Origins of recently gained introns in Caenorhabditis -- Coghlan and Wolfe 101 (31): 11362 -- Proceedings of the National Academy of Sciences
www.pnas.org
intron gain, perhaps?
Posted by stajich with 1 comment to nematode intron on Sat Aug 12 2006 at 23:23 UTC | info | related
 
The origin of recent introns: transposons?
Scott W Roy
Genome biology 5 (12), 251 (2004)
info:pmid/15575977 | info:doi/10.1186/gb-2004-5-12-251
what are introns that appear gains in C.elegans coming from?
Posted by stajich to nematode intron on Sat Aug 12 2006 at 23:23 UTC | info | related
 
The pattern of intron loss -- Roy and Gilbert 102 (3): 713 -- Proceedings of the National Academy of Sciences
www.pnas.org
re-analysis of rogozin et al dataset that uses a novel ML method rather than parsimony
Posted by stajich to intron on Sat Aug 12 2006 at 23:21 UTC | info | related
 
Complex early genes -- Roy and Gilbert 102 (6): 1986 -- Proceedings of the National Academy of Sciences
www.pnas.org
equations and theory for inferring ancestral state of introns in common ancestors
Posted by stajich to intron on Sat Aug 12 2006 at 23:20 UTC | info | related

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