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spitshine's bookmarks matching tag "E. coli"
 
Number of articles per page:
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Improved prediction of bacterial transcription start sites
J J Gordon et al.
Bioinformatics (Oxford, England) 22 (2), 142-8 (15 Jan 2006)
info:pmid/16287942 | info:doi/10.1093/bioinformatics/bti771
"Our approaches to TSS prediction are based upon an ensemble of support vector machines (SVMs) employing a variant of the mismatch string kernel. This classifier is subsequently combined with a PWM and a model based on distribution of distances from TSS to gene start."
Posted by spitshine and 1 other to E. coli predictions SVM operons on Fri Aug 15 2008 at 02:25 UTC | info | related
 
Autoregulation of the Escherichia coli melR promoter: repression involves four molecules of MelR
Shivanthi Samarasinghe et al.
Nucleic Acids Research 36 (8), (01 May 2008)
info:pmid/18346968 | info:doi/10.1093/nar/gkn119
Posted by spitshine to regulation E. coli transcription factors melr on Tue May 06 2008 at 12:34 UTC | info | related
 
Interactions of Escherichia coli sigma 70 within the transcription elongation complex
Shirley Daube and Peter von Hippel
Proceedings of the National Academy of Sciences 96 (15), 8390-5 (20 Jul 1999)
info:doi/10.1073/pnas.96.15.8390
Posted by spitshine to E. coli sigma factors on Tue Jan 22 2008 at 16:00 UTC | info | related
 
Extensive genomic diversity and selective conservation of virulence-determinants in enterohemorrhagic Escherichia coli strains of O157 and non-O157 serotypes
Yoshitoshi Ogura et al.
Genome Biology 8 (7), 138 (10 Jul 2007)
info:doi/10.1186/gb-2007-8-7-r138
Posted by spitshine to E. coli EHEC virulence factors on Fri Aug 03 2007 at 06:55 UTC | info | related
 
Structural analysis of a prototypical ATPase from the type III secretion system.
Raz Zarivach et al.
Nat Struct Mol Biol, (21 Jan 2007)
info:pmid/17237797 | info:doi/10.1038/nsmb1196
Posted by spitshine to structure virulence E. coli TTSS on Thu Jan 25 2007 at 13:24 UTC | info | related
 
Phylogenetic comparisons reveal multiple acquisitions of the toxin genes by enterotoxigenic Escherichia coli strains of different evolutionary lineages.
Sue M Turner et al.
J Clin Microbiol, (18 Oct 2006)
info:pmid/17050815 | info:doi/10.1128/JCM.01474-06
Posted by spitshine to toxins E. coli virulence on Mon Oct 23 2006 at 11:42 UTC | info | related
 
An extensive repertoire of type III secretion effectors in Escherichia coli O157 and the role of lambdoid phages in their dissemination.
Toru Tobe et al.
Proceedings of the National Academy of Sciences 103 (40), 14941-6 (21 Sep 2006)
info:pmid/16990433 | info:doi/10.1073/pnas.0604891103
Posted by spitshine and 3 others to effectors EHEC E. coli virulence factors on Mon Sep 25 2006 at 10:14 UTC | info | related
 
Structural and biochemical characterization of gentisate 1,2-dioxygenase from Escherichia coli O157:H7
Melanie A. Adams et al.
Molecular Microbiology 61 (6), 1469-84 (2006)
info:doi/10.1111/j.1365-2958.2006.05334.x
Posted by spitshine to E. coli virulence factors EHEC on Mon Sep 11 2006 at 10:48 UTC | info | related
 
Escherichia coli Induces DNA Double-Strand Breaks in Eukaryotic Cells -- Nougayrède et al. 313 (5788): 848 -- Science
www.sciencemag.org
Posted by spitshine to cytotoxity E. coli on Fri Aug 11 2006 at 08:26 UTC | info | related

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