Connotea: orbeckst's bookmarks matching tag "coarse grained models"

orbeckst's tags:

A – Z

By Usage

Find:

ab initio calculations

atomic force microscopy

bilayer:vesicle fusion

classical forcefields

clustering

cmap

coarse grained models

coarse grained simulations

computational biology

computing

concentration

confinement

conformational changes

cyclic nucleotide-gated channels

delaunay triangulation

diffusion coefficient

electronic structure calculation

exhaustive enumeration

Flory's isolated-pair hypothesis

fluid mosaic membrane model

free energy calculations

free energy landscape

high-energy intermediate ligands

Hinge

histogram reweighting

mechanical microenvironment

Periodic boundary conditions

Poisson-Nernst-Planc- k

polarisability

Polymers

pores

potential of mean force

pressure

Principal Component Analysis

secondary structure prediction

single channel recordings

standard free energy of binding

staphylococcus aureus

thermodynamic integration

transition state ensemble

transitional

transmembrane potential

Users who used "coarse grained models":

orbeckst

orbeckst's bookmarks matching tag "coarse grained models"

Number of articles per page:

10 | 25 | 50 | 100

Src Kinase Conformational Activation: Thermodynamics, Pathways, and Mechanisms

PLoS Computational Biology 4 (3), e1000047 (2008)

info:doi/10.1371/journal.pcbi.1000047

Posted by orbeckst to free energy landscape coarse grained models model markov kinetics kinase Src on Mon Mar 31 2008 at 15:30 UTC | info | related

Coarse-grained models of protein folding: toy models or predictive tools

Current Opinion in Structural Biology, (2007)

info:doi/10.1016/j.sbi.2007.10.005

Posted by orbeckst to Multiscale thermodynamics coarse grained models folding on Thu Feb 21 2008 at 10:10 UTC | info | related

Comparison of Thermodynamic Properties of Coarse-Grained and Atomic-Level Simulation Models

Riccardo Baron et al.

ChemPhysChem 8 (3), 452-61 (2007)

info:doi/10.1002/cphc.200600658

Posted by orbeckst and 1 other to Marrink thermodynamics force field coarse grained models on Mon Feb 12 2007 at 17:41 UTC | info | related

Coarse-Grained Molecular Dynamics Simulations of a Rotating Bacterial Flagellum

Anton Arkhipov et al.

Biophysical Journal 91 (12), 4589-97 (15 Dec 2006)

info:doi/10.1529/biophysj.106.093443

Posted by orbeckst and 1 other to molecular dynamics flagellum coarse grained simulations coarse grained models on Thu Jan 04 2007 at 08:42 UTC | info | related

Coupling between Lipid Shape and Membrane Curvature -- Cooke and Deserno 91 (2): 487 -- Biophysical Journal

www.biophysj.org

Posted by orbeckst to journal-club coarse grained simulations coarse grained models MD lipid bilayers on Wed Jul 26 2006 at 21:06 UTC | info | related

Markov propagation of allosteric effects in biomolecular systems: application to GroEL-GroES

Chakra Chennubhotla and Ivet Bahar

Molecular systems biology 2, E1 (04 Jul 2006)

info:pmid/16820777 | info:doi/10.1038/msb4100075

Posted by orbeckst and 3 others with 1 comment to journal-club groel proteins markov model Allostery coarse grained models on Wed Jul 26 2006 at 20:24 UTC | info | related

Elastic network models for understanding biomolecular machinery: from enzymes to supramolecular assemblies

Physical Biology 2 (4), S173 (2005)

info:doi/10.1088/1478-3975/2/4/S12

Posted by orbeckst and 1 other to normal mode analysis proteins motions viral capsids coarse grained models GNM on Thu Feb 02 2006 at 21:28 UTC | info | related

<< Prev 0 Showing entries 1 to 7 of 7 total Next 0 >>

orbeckst's tags:

Users who used "coarse grained models":

Log in

Toolbox

Related tags:

Related users: