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Supervised detection of conserved motifs in DNA sequences with cosmo.
Oliver Bembom, Sunduz Keles, and Mark Van Der Laan
Statistical applications in genetics and molecular biology 6, 8 (2007)
info:pmid/17402923 | info:doi/10.2202/1544-6115.1260
Posted by maximilianh to algorithm motif discovery on Thu Apr 05 2007 at 08:44 UTC | info | related
 
An improved gibbs sampling method for motif discovery via sequence weighting.
Xin Chen and Tao Jiang
Computational systems bioinformatics / Life Sciences Society. Computational Systems Bioinformatics Conference, 239-47 (2006)
info:pmid/17369642
Posted by maximilianh to algorithm motif discovery on Thu Mar 22 2007 at 10:19 UTC | info | related
 
A methodology for motif discovery employing iterated cluster re-assignment.
Osman Abul, Finn Drabløs, and Geir Sandve
Computational systems bioinformatics / Life Sciences Society. Computational Systems Bioinformatics Conference, 257-68 (2006)
info:pmid/17369644
Posted by maximilianh to algorithm motif discovery on Thu Mar 22 2007 at 10:19 UTC | info | related
 
Computing exact P-values for DNA motifs -- Zhang et al. 23 (5): 531 -- Bioinformatics
bioinformatics.oxfordjournals.org
Posted by maximilianh and 1 other to motif algorithm motif scanning motif discovery on Wed Mar 21 2007 at 14:17 UTC | info | related
 
Predicting transcription factor affinities to DNA from a biophysical model -- Roider et al. 23 (2): 134 -- Bioinformatics
bioinformatics.oxfordjournals.org
Posted by maximilianh and 1 other to algorithm motif scanning on Sat Jan 20 2007 at 13:42 UTC | info | related
 
Learning probabilistic models of cis-regulatory modules that represent logical and spatial aspects -- Noto and Craven 23 (2): e156 -- Bioinformatics
bioinformatics.oxfordjournals.org
Posted by maximilianh and 1 other to algorithm motif discovery on Sat Jan 20 2007 at 13:39 UTC | info | related

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