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GenMiner: mining non-redundant association rules from integrated gene expression data and annotations
Ricardo Martinez, Nicolas Pasquier, and Claude Pasquier
Bioinformatics 24 (22), (15 Nov 2008)
info:pmid/18799482 | info:doi/10.1093/bioinformatics/btn490
Posted by dswan to genomic expression Association annotation on Thu Nov 06 2008 at 10:02 UTC | info | related
 
FunNet: an integrative tool for exploring transcriptional interactions
Edi Prifti et al.
Bioinformatics 24 (22), (15 Nov 2008)
info:pmid/18799481 | info:doi/10.1093/bioinformatics/btn492
Posted by dswan to transcriptomics application interaction on Thu Nov 06 2008 at 09:55 UTC | info | related
 
Gene set enrichment analysis using linear models and diagnostics
Assaf Oron, Zhen Jiang, and Robert Gentleman
Bioinformatics 24 (22), (15 Nov 2008)
info:pmid/18790795 | info:doi/10.1093/bioinformatics/btn465
Posted by dswan and 1 other to Linear Models GSEA on Thu Nov 06 2008 at 09:53 UTC | info | related
 
Making the most of microarray data
Terry Gaasterland and Stefan Bekiranov
Nat Genet 24 (3), 204-6 (Mar 2000)
info:doi/10.1038/73392
Posted by dswan to SVM Microarray on Mon Nov 03 2008 at 16:18 UTC | info | related
 
Support vector machines and kernels for computational biology.
Asa Ben-Hur et al.
PLoS computational biology 4 (10), e1000173 (Oct 2008)
info:pmid/18974822 | info:doi/10.1371/journal.pcbi.1000173
Posted by dswan and 6 others to SVM on Mon Nov 03 2008 at 09:49 UTC | info | related
 
The rough guide to in silico function prediction, or how to use sequence and structure information to predict protein function.
Marco Punta and Yanay Ofran
PLoS computational biology 4 (10), e1000160 (Oct 2008)
info:pmid/18974821 | info:doi/10.1371/journal.pcbi.1000160
Posted by dswan and 2 others to Protein function on Mon Nov 03 2008 at 09:47 UTC | info | related
 
Analysis of differential gene-regulatory responses to zinc in human intestinal and placental cell lines.
Kelly A Jackson et al.
The British journal of nutrition, 1-10 (24 Oct 2008)
info:pmid/18947441 | info:doi/10.1017/S0007114508094634
Posted by dswan (who is an author) to intestine zinc expression regulation on Mon Oct 27 2008 at 10:25 UTC | info | related
 
A genome wide analysis of the response to uncapped telomeres in budding yeast reveals a novel role for the NAD+ biosynthetic gene BNA2 in chromosome end protection.
Amanda Greenall et al.
Genome Biology 9 (10), R146 (01 Oct 2008)
info:pmid/18828915 | info:doi/10.1186/gb-2008-9-10-r146
Posted by dswan (who is an author) and 1 other to uncapping Nad Telomere expression yeast on Mon Oct 27 2008 at 10:20 UTC | info | related
 
Permutation - based statistical tests for multiple hypotheses
Anyela Camargo et al.
Source Code for Biology and Medicine 3 (1), 15 (21 Oct 2008)
info:doi/10.1186/1751-0473-3-15
Posted by dswan to multiple testing on Mon Oct 27 2008 at 09:47 UTC | info | related
 
Adjusting batch effects in microarray expression data using empirical Bayes methods
W Evan Johnson, Cheng Li, and Ariel Rabinovic
Biostatistics (Oxford, England) 8 (1), 118-27 (01 Jan 2007)
info:pmid/16632515 | info:doi/10.1093/biostatistics/kxj037
Posted by dswan and 2 others to normalisation batch Microarray on Thu Oct 23 2008 at 09:31 UTC | info | related

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