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Modular networks and cumulative impact of lateral transfer in prokaryote genome evolution
info:doi/10.1073/pnas.0800679105
Posted by chkuo to bacteria network lateral gene transfer on Wed Jul 23 2008 at 18:39 UTC | info | related
 
Horizontal gene transfer in eukaryotic evolution
Patrick Keeling and Jeffrey Palmer
Nat Rev Genet 9 (8), 605-18 (Aug 2008)
info:doi/10.1038/nrg2386
Posted by chkuo to eukaryotes lateral gene transfer on Fri Jul 18 2008 at 22:38 UTC | info | related
 
Large gene overlaps in prokaryotic genomes: result of functional constraints or mispredictions?
Albert Palleja, Eoghan D Harrington, and Peer Bork
BMC Genomics 9 (1), 335 (15 Jul 2008)
info:doi/10.1186/1471-2164-9-335
Posted by chkuo to bacteria annotation genomics on Fri Jul 18 2008 at 16:49 UTC | info | related
 
PLoS Computational Biology: The Evolution of Two-Component Systems in Bacteria Reveals Different Strategies for Niche Adaptation
www.ploscompbiol.org
Posted by chkuo to orphan gene adaptation on Thu Jul 17 2008 at 21:27 UTC | info | related
 
Unravelling the ORFan puzzle
Comparative and Functional Genomics 4 (4), 432 (2003)
info:doi/10.1002/cfg.311
Posted by chkuo to orphan gene adaptation on Thu Jul 17 2008 at 21:25 UTC | info | related
 
Limitations of compositional approach to identifying horizontally transferred genes.
B Wang
Journal of molecular evolution 53 (3), 244-50 (Sep 2001)
info:pmid/11523011 | info:doi/10.1007/s002390010214
Posted by chkuo to codon usage on Thu Jul 17 2008 at 17:21 UTC | info | related
 
Codon Bias and Base Composition Are Poor Indicators of Horizontally Transferred Genes
Liisa Koski, Richard Morton, and G Golding
Molecular Biology and Evolution 18 (3), (01 Mar 2001)
info:pmid/11230541
Posted by chkuo to codon usage on Thu Jul 17 2008 at 17:15 UTC | info | related
 
Horizontal gene transfer: A critical view
Horizontal gene transfer a critical view
C G Kurland, B Canback, and Otto G Berg
Proceedings of the National Academy of Sciences of the United States of America. 100 (17), 9658-62 (19 Aug 2003)
info:pmid/12902542 | info:doi/10.1073/pnas.1632870100
Posted by chkuo and 2 others to review on Wed Jul 16 2008 at 18:06 UTC | info | related
 
Horizontal gene transfer, genome innovation and evolution
J Gogarten and Jeffrey Townsend
Nature reviews. Microbiology. 3 (9), 679-87 (Sep 2005)
info:pmid/16138096 | info:doi/10.1038/nrmicro1204
Posted by chkuo and 5 others with 1 comment to review on Wed Jul 16 2008 at 18:05 UTC | info | related
 
INDIVIDUAL-BASED MODELING OF ECOLOGICAL AND EVOLUTIONARY PROCESSES1
Annual Review of Ecology Evolution and Systematics 36 (1), 147 (2005)
info:doi/10.1146/annurev.ecolsys.36.102003.152644
Posted by chkuo to model on Wed Apr 30 2008 at 19:04 UTC | info | related

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