Connotea: arve's bookmarks

arve's tags:

A – Z

By Usage

Find:

454

accuracy

gene family evolution

genome-rearrangement- s

ligand binding domain

phylgenetic footprinting

positive-feedback-lo- op

positive-selection

posterior probability

propensity for gene loss

secondary-structure-- prediction

statistical alignment

structure

sub-functionalizatio- n

transcription factors

transcripts

translation

transmembrane protein

ultraconserved elements

whole-genome duplication

Wolfe

xenology

yeast

Free online reference management for clinicians and scientists

Bookmarks by "arve".

These articles and links have been posted by Connotea user "arve".
To start your own library:

Learn more

Watch a short video (2m 41s)

arve's bookmarks

This user doesn't have a profile on the Connotea Community Pages yet.

Number of articles per page:

10 | 25 | 50 | 100

Phylogeny-Aware Gap Placement Prevents Errors in Sequence Alignment and Evolutionary Analysis

Ari Loytynoja and Nick Goldman

Science 320 (5883), 1632-5 (20 Jun 2008)

info:doi/10.1126/science.1158395

Posted by arve and 4 others to multialignment indels probabilistic model evolution on Tue Jun 24 2008 at 08:24 UTC | info | related

PLoS Computational Biology 4 (5), e1000063 (2008)

info:doi/10.1371/journal.pcbi.1000063

Posted by arve to similarity domains homology on Wed Jun 18 2008 at 10:12 UTC | info | related

Parsimony, Likelihood, and the Role of Models in Molecular Phylogenetics

Mike Steel and David Penny

Molecular Biology and Evolution 17 (6), (01 Jun 2000)

info:pmid/10833190

Posted by arve to maximum likelihood good-read parsimony review phylogeny on Sun Jun 15 2008 at 10:07 UTC | info | related

An Improved General Amino-Acid Replacement Matrix

Molecular Biology and Evolution, (2008)

info:doi/10.1093/molbev/msn067

Posted by arve and 1 other to estimate substitution-rates RATES matrix model evolution on Sun Jun 15 2008 at 06:59 UTC | info | related

The new paradigm of flow cell sequencing

Robert A. Holt and Steven J.M. Jones

Genome Research 18 (6), 839-46 (01 Jun 2008)

info:doi/10.1101/gr.073262.107

Posted by arve and 3 others to 454 genome sequencing review on Tue Jun 03 2008 at 06:37 UTC | info | related

A Probabilistic Model of Local Sequence Alignment That Simplifies Statistical Significance Estimation

A probabilistic model of local sequence alignment that simplifies statistical significance estimation

Sean R Eddy

PLoS computational biology 4 (5), e1000069 (May 2008)

info:pmid/18516236 | info:doi/10.1371/journal.pcbi.1000069

Posted by arve and 2 others to score-significance Eddy Alignment significance on Sat May 31 2008 at 07:14 UTC | info | related

Evolution of +1 Programmed Frameshifting Signals and Frameshift-Regulating tRNAs in the Order Saccharomycetales

Journal of Molecular Evolution 63 (4), 545 (2006)

info:doi/10.1007/s00239-005-0311-0

Posted by arve to codonalignment test case frameshift yeast evolution on Sat May 24 2008 at 11:10 UTC | info | related

Simple is beautiful: a straightforward approach to improve the delineation of true and false positives in PSI-BLAST searches

Bioinformatics 24 (11), 1339 (01 Jun 2008)

info:pmid/18403442 | info:doi/10.1093/bioinformatics/btn130

Posted by arve and 3 others to E-Value psiblast significance Blast on Mon May 19 2008 at 13:19 UTC | info | related

MAMOT: Hidden MArkov MOdeling Tool

Bioinformatics, (2008)

info:doi/10.1093/bioinformatics/btn201

Posted by arve and 1 other to hmm Software DNA Protein model on Mon May 19 2008 at 13:17 UTC | info | related

Extension of Lander-Waterman theory for sequencing filtered DNA libraries

BMC Bioinformatics 6 (1), 245 (2005)

info:doi/10.1186/1471-2105-6-245

Posted by arve to lander-waterman Coverage genome sequencing on Wed May 14 2008 at 09:34 UTC | info | related

<< Prev 0 Showing entries 1 to 10 of 341 total Next 10 >>

arve's tags:

Log in

Toolbox

Related tags:

Related users: