Connotea: akborder's bookmarks matching tag Alignment

akborder's groups:

belangeri (created by nookland)

akborder's tags:

A – Z

By Usage

Find:

a-bruijn

abstract

artificial intelligence

computational geometry

evolutionary distance

functional programming

System Administration

Users who used Alignment:

akborder's bookmarks matching tag Alignment

Number of articles per page:

10 | 25 | 50 | 100

The estimation of statistical parameters for local alignment score distributions.

S F Altschul et al.

Nucleic acids research 29 (2), 351-61 (15 Jan 2001)

info:pmid/11139604

Posted by akborder to scoring Alignment statistics on Thu May 08 2008 at 10:21 UTC | info | related

On the statistical assessment of similarities in DNA sequences.

J G Reich, H Drabsch, and A Däumler

Nucleic acids research 12 (13), 5529-43 (11 Jul 1984)

info:pmid/6462914

Posted by akborder to scoring Alignment toread statistics on Thu May 08 2008 at 09:53 UTC | info | related

Multiple DNA and protein sequence alignment based on segment-to-segment comparison.

B Morgenstern, A Dress, and T Werner

Proceedings of the National Academy of Sciences of the United States of America. 93 (22), 12098-12103 (29 Oct 1996)

info:pmid/8901539

Posted by akborder and 2 others to dialign Alignment algorithm on Sun Dec 16 2007 at 21:13 UTC | info | related

Issues in searching molecular sequence databases

Stephen Altschul et al.

Nature genetics 6 (2), 119-29 (Feb 1994)

info:pmid/8162065 | info:doi/10.1038/ng0294-119

Posted by akborder and 1 other to scoring Alignment on Wed Dec 05 2007 at 10:46 UTC | info | related

Amino Acid Substitution Matrices from Protein Blocks

Steven Henikoff and Jorja Henikoff

Proceedings of the National Academy of Sciences 89 (22), 10915 (1992)

info:doi/10.1073/pnas.89.22.10915

Posted by akborder to blosum scoring Alignment on Sun Dec 02 2007 at 13:42 UTC | info | related

Exploring genomic dark matter: a critical assessment of the performance of homology search methods on noncoding RNA.

Exploring genomic dark matter A critical assessment of the performance of homology search methods on noncoding RNA

Eva Freyhult, Jonathan Bollback, and Paul Gardner

Genome research 17 (1), 117-25 (Jan 2007)

info:pmid/17151342 | info:doi/10.1101/gr.5890907

Posted by akborder and 3 others to noncoding Alignment on Sat Sep 22 2007 at 14:15 UTC | info | related

PALMA: mRNA to genome alignments using large margin algorithms.

Uta Schulze et al.

Bioinformatics (Oxford, England) 23 (15), 1892-1900 (01 Aug 2007)

info:pmid/17537755 | info:doi/10.1093/bioinformatics/btm275

Posted by akborder to Alignment algorithm mRNA on Sat Sep 22 2007 at 12:46 UTC | info | related

160-fold acceleration of the Smith-Waterman algorithm using a field programmable gate array (FPGA).

Isaac Li, Warren Shum, and Kevin Truong

BMC bioinformatics 8, 185 (2007)

info:pmid/17555593 | info:doi/10.1186/1471-2105-8-185

Posted by akborder and 2 others to fgpa Smith-Waterman Alignment algorithm on Sat Sep 22 2007 at 12:33 UTC | info | related

Probabilistic whole-genome alignments reveal high indel rates in the human and mouse genomes.

Gerton Lunter

Bioinformatics (Oxford, England) 23 (13), 289-96 (01 Jul 2007)

info:pmid/17646308 | info:doi/10.1093/bioinformatics/btm185

Posted by akborder to Alignment genome mmusculus hsapiens indel genome rearrangement on Sat Sep 22 2007 at 10:00 UTC | info | related

Multiple alignment by aligning alignments.

Travis Wheeler and John Kececioglu

Bioinformatics (Oxford, England) 23 (13), 559-68 (01 Jul 2007)

info:pmid/17646343 | info:doi/10.1093/bioinformatics/btm226

Posted by akborder to multiple alignment Alignment on Sat Sep 22 2007 at 08:12 UTC | info | related

<< Prev 0 Showing entries 1 to 10 of 105 total Next 10 >>

akborder's groups:

akborder's tags:

Users who used Alignment:

Log in

Toolbox

Related tags: