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Predicting the effects of coding non-synonymous variants on protein function using the SIFT algorithm

Prateek Kumar, Steven Henikoff, and Pauline Ng

Nat. Protocols 4 (8), 1073-81 (Jun 2009)

info:doi/10.1038/nprot.2009.86

Posted by claraya to designseq computational protocol prediction Codon Protein mutation on Thu Jun 25 2009 at 19:31 UTC | info | related

Predicting the effects of coding non-synonymous variants on protein function using the SIFT algorithm

Prateek Kumar, Steven Henikoff, and Pauline Ng

Nat. Protocols 4 (8), 1073-81 (Jun 2009)

info:doi/10.1038/nprot.2009.86

Posted by claraya to designseq computational protocol prediction Codon Protein mutation on Thu Jun 25 2009 at 19:31 UTC | info | related

Evidence that microRNA precursors, unlike other non-coding RNAs, have lower folding free energies than random sequences.

Bioinformatics (Oxford, England) 20 (17), 2911-7 (22 Nov 2004)

info:pmid/15217813 | info:doi/10.1093/bioinformatics/bth374

Posted by akborder and 1 other to prediction miRNA algorithm on Wed Jun 24 2009 at 08:52 UTC | info | related

Progress in predicting seizure episodes with nonlinear methods.

John R Hughes

Epilepsy & behavior : E&B 12 (1), 128-35 (Jan 2008)

info:pmid/18086457 | info:doi/10.1016/j.yebeh.2007.08.004

Posted by Marinka to prediction epilepsy on Tue Jun 23 2009 at 07:31 UTC | info | related

Identification of hundreds of conserved and nonconserved human microRNAs

Isaac Bentwich et al.

Nature genetics. 37 (7), 766-70 (Jul 2005)

info:pmid/15965474 | info:doi/10.1038/ng1590

Posted by akborder and 4 others to hsapiens prediction miRNA on Tue Jun 23 2009 at 07:10 UTC | info | related

Prediction of locally stable RNA secondary structures for genome-wide surveys

I Hofacker, B Priwitzer, and P Stadler

Bioinformatics 20 (2), (22 Jan 2004)

info:pmid/14734309 | info:doi/10.1093/bioinformatics/btg388

Posted by akborder to folding prediction miRNA on Mon Jun 22 2009 at 11:31 UTC | info | related

Prognosis and prognostic research: application and impact of prognostic models in clinical practice

BMJ 338 (jun04 2), b606 (2009)

info:doi/10.1136/bmj.b606

Posted by dmanuel to prediction on Fri Jun 19 2009 at 12:04 UTC | info | related

The microRNAs of Caenorhabditis elegans

Lee P. Lim et al.

Genes and Development 17 (8), 991-1008 (15 Apr 2003)

info:pmid/12672692 | info:doi/10.1101/gad.1074403

Posted by akborder and 3 others to Celegans prediction miRNA on Fri Jun 19 2009 at 10:09 UTC | info | related

Vertebrate MicroRNA Genes

Vertebrate microRNA genes

Lee P Lim et al.

Science 299 (5612), 1540 (07 Mar 2003)

info:pmid/12624257 | info:doi/10.1126/science.1080372

Posted by akborder and 2 others to vertebrate prediction miRNA on Fri Jun 19 2009 at 10:06 UTC | info | related

Human microRNA prediction through a probabilistic co-learning model of sequence and structure

Nucleic Acids Research 33 (11), 3570 (24 Jun 2005)

info:pmid/15987789 | info:doi/10.1093/nar/gki668

Posted by akborder to hsapiens prediction miRNA on Fri Jun 19 2009 at 10:01 UTC | info | related

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