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Recent "phylogenomics" articles

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The Gene Ontology's Reference Genome Project: A Unified Framework for Functional Annotation across Species
PLoS Computational Biology 5 (7), e1000431 (2009)
info:doi/10.1371/journal.pcbi.1000431
Posted by tjv to gene annotation phylogenomics gene ontology on Fri Jul 03 2009 at 16:15 UTC | info | related
 
Rapid and Accurate Large-Scale Coestimation of Sequence Alignments and Phylogenetic Trees
Kevin Liu et al.
Science 324 (5934), 1561-4 (19 Jun 2009)
info:doi/10.1126/science.1171243
Posted by hgaskins and 3 others to evolution comparative genomics phylogenomics on Mon Jun 29 2009 at 14:49 UTC | info | related
 
Microbiology. Seeing green and red in diatom genomes.
Tal Dagan and William Martin
Science (New York, N.Y.) 324 (5935), 1651-2 (26 Jun 2009)
info:pmid/19556490 | info:doi/10.1126/science.1175765
Posted by ahmedmoustafa to Photosynthesis phylogenomics endosymbiosis Prasinophytes Diatoms Algae Green red on Sat Jun 27 2009 at 22:10 UTC | info | related
 
Genomic footprints of a cryptic plastid endosymbiosis in diatoms.
Ahmed Moustafa et al.
Science (New York, N.Y.) 324 (5935), 1724-6 (26 Jun 2009)
info:pmid/19556510 | info:doi/10.1126/science.1172983
Posted by ahmedmoustafa (who is an author) and 1 other to Green Algae red endosymbiosis Photosynthesis phylogenomics Prasinophytes Diatoms evolution on Sat Jun 27 2009 at 21:58 UTC | info | related
 
The impact of outgroup choice and missing data on major seed plant phylogenetics using genome-wide EST data.
Jose Eduardo de la Torre-Bárcena et al.
PloS one 4 (6), e5764 (2009)
info:pmid/19503618 | info:doi/10.1371/journal.pone.0005764
Posted by tjv to phylogenomics phylogenetics plant evolution on Wed Jun 17 2009 at 15:32 UTC | info | related
 
Family classification without domain chaining
Bioinformatics 25 (12), i45 (2009)
info:doi/10.1093/bioinformatics/btp207
Posted by tjv to domain shuffling phylogenomics protein families on Thu May 28 2009 at 18:25 UTC | info | related
 
The PhyLoTA Browser: Processing GenBank for Molecular Phylogenetics Research
Systematic Biology 57 (3), 335 (2008)
info:doi/10.1080/10635150802158688
Posted by tjv to phylogenomics phyloinformatics on Thu May 28 2009 at 02:43 UTC | info | related
 
A phylogenomic approach for studying plastid endosymbiosis.
Ahmed Moustafa et al.
Genome informatics. International Conference on Genome Informatics 21, 165-76 (2008)
info:pmid/19425156
Posted by ahmedmoustafa (who is an author) to phylogenomics Phylogenetic Photosynthesis endosymbiosis on Sun May 17 2009 at 03:01 UTC | info | related
 
Phylogenomics and the reconstruction of the tree of life
Frederic Delsuc, Henner Brinkmann, and Herve Philippe
Nature reviews. Genetics. 6 (5), 361-75 (May 2005)
info:pmid/15861208 | info:doi/10.1038/nrg1603
Posted by suja and 5 others to introduction review phylogenomics on Fri May 01 2009 at 05:03 UTC | info | related
 
How confident can we be that orthologs are similar, but paralogs differ?
Romain A Studer and Marc Robinson-Rechavi
Trends in genetics : TIG 25 (5), 210 (13 Apr 2009)
info:pmid/19368988 | info:doi/10.1016/j.tig.2009.03.004
Posted by tjv and 2 others to phylogenomics genomics gene duplication paralogy orthology on Mon Apr 20 2009 at 00:52 UTC | info | related

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