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An overview of the wcd EST Clustering Tool
S Hazelhurst et al.
Bioinformatics, (2008)
Posted by aford and 2 others to clustering on Wed Aug 13 2008 at 14:29 UTC | info | related
 
Origin of transition metal clustering tendencies in GaAs based dilute magnetic semiconductors
Priya Mahadevan, J Osorio-Guillen, and Alex Zunger
Applied Physics Letters 86 (17), 172504 (2005)
While isovalent doping of GaAs (e.g., by In) leads to a repulsion between the solute atoms, two Cr, Mn, or Fe atoms in GaAs are found to have lower energy than the well-separated pair, and hence attract each other. The strong bonding interaction between levels with t2 symmetry on the transition metal (TM) atoms results in these atoms exhibiting a strong tendency to cluster. Using first-principles calculations, we show that this attraction is maximal for Cr, Mn, and Fe while it is minimal for V. The difference is attributed to the symmetry of the highest occupied levels. While the intention is to find possible choices of spintronic materials that show a reduced tendency to cluster, one finds that the conditions that minimize clustering tendencies also minimize the stabilization of the magnetic state.
 
Clustering by Passing Messages Between Data Points
Clustering by passing messages between data points
Brendan Frey and Delbert Dueck
Science (New York, N.Y.) 315 (5814), 1136800-1136976 (11 Jan 2007)
Posted by tjv and 10 others to clustering on Sat Aug 02 2008 at 12:49 UTC | info | related
 
Klusters, NeuroScope, NDManager: a free software suite for neurophysiological data processing and visualization.
Klusters NeuroScope NDManager A free software suite for neurophysiological data processing and visualization
Lynn Hazan, Michaël Zugaro, and György Buzsáki
Journal of neuroscience methods. 155 (2), 207-16 (15 Sep 2006)
 
Inferring modules of functionally interacting proteins using the Bond Energy Algorithm
BMC Bioinformatics 9 (1), 285 (17 Jun 2008)
 
Automated Tag Clustering: Improving search and exploration in the tag space
Grigory Begelman, Philipp Keller, and Frank Smadja
 
Partial mixture model for tight clustering of gene expression time-course
Yinyin Yuan, Chang-Tsun Li, and Roland Wilson
BMC Bioinformatics 9 (1), 287 (18 Jun 2008)
 
Efficient algorithms for accurate hierarchical clustering of huge datasets: tackling the entire protein space
Yaniv Loewenstein et al.
Bioinformatics (Oxford, England) 24 (13), i41-9 (01 Jul 2008)
Posted by ibycus and 1 other to clustering algorithm Protein on Thu Jul 10 2008 at 09:26 UTC | info | related
 
Efficient algorithms for accurate hierarchical clustering of huge datasets: tackling the entire protein space.
Yaniv Loewenstein et al.
Bioinformatics (Oxford, England) 24 (13), i41-9 (01 Jul 2008)
Posted by mndoci and 1 other to clustering Bioinformatics on Thu Jul 10 2008 at 03:48 UTC | info | related
 
PuReD-MCL: a graph-based PubMed document clustering methodology.
T Theodosiou et al.
Bioinformatics (Oxford, England), (01 Jul 2008)

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