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Recent "algorithms" articles

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Automatically extracting functionally equivalent proteins from SwissProt
Lisa EM McMillan and Andrew CR Martin
BMC Bioinformatics 9 (1), 418 (06 Oct 2008)
info:doi/10.1186/1471-2105-9-418
Posted by lmrodriguezr and 1 other to algorithms annotation protein families proteins function function on Wed Oct 08 2008 at 06:12 UTC | info | related
 
Triad pattern algorithm for predicting strong promoter candidates in bacterial genomes
BMC Bioinformatics 9 (1), 233 (2008)
info:doi/10.1186/1471-2105-9-233
Posted by lmrodriguezr to genomes sequences algorithms bacteria to read on Mon Oct 06 2008 at 04:39 UTC | info | related
 
Mapping short DNA sequencing reads and calling variants using mapping quality scores
Heng Li, Jue Ruan, and Richard Durbin
Genome Research, (19 Aug 2008)
info:pmid/18714091 | info:doi/10.1101/gr.078212.108
Posted by apm and 4 others to short reads comparative mapping MAQ algorithms Alignment sanger on Mon Sep 29 2008 at 12:43 UTC | info | related
 
Polyploids, genome halving and phylogeny
David Sankoff, Chunfang Zheng, and Qian Zhu
Bioinformatics (Oxford, England) 23 (13), i433-9 (01 Jul 2007)
info:pmid/17646328 | info:doi/10.1093/bioinformatics/btm169
Posted by apm and 2 others to algorithms polyploidy phylogenetic approaches on Mon Sep 29 2008 at 12:27 UTC | info | related
 
Efficient algorithms for multichromosomal genome rearrangements
Journal of Computer and System Sciences 65 (3), 587 (2002)
info:doi/10.1016/s0022-0000(02)00011-9
Posted by apm to algorithms genome reconstruction genome rearrangement on Mon Sep 29 2008 at 12:24 UTC | info | related
 
Naive Bayes
download.oracle.com
Posted by letouzey to bayes NAIVE algorithms artificial intelligence odm oracle on Sat Sep 27 2008 at 21:20 UTC | info | related
 
How to present a paper on experimental work with algorithms
Catherine McGeoch and Bernard Moret
SIGACT News 30 (4), 85-90 (1999)
info:doi/10.1145/337885.337899
Posted by aford and 1 other to algorithms experimental on Wed Aug 13 2008 at 14:30 UTC | info | related
 
De novo computational design of retro-aldol enzymes.
Science (New York, N.Y.) 319 (5868), 1387-91 (07 Mar 2008)
info:pmid/18323453 | info:doi/10.1126/science.1152692
Posted by gabanyi and 4 others to Protein engineering Protein Conformation Molecular Models kinetics hydrophobicity hydrogen bonding X-ray crystallography Computer Simulation Catalytic Domain Catalysis binding sites algorithms metabolism chemistry Aldehyde-Lyases on Wed Aug 06 2008 at 18:42 UTC | info | related
 
Parametrization of analytic interatomic potential functions using neural networks
link.aip.org
A generalized method that permits the parameters of an arbitrary empirical potential to be efficiently and accurately fitted to a database is presented. The method permits the values of a subset of the potential parameters to be considered as general functions of the internal coordinates that define the instantaneous configuration of the system. The parameters in this subset are computed by a generalized neural network (NN) with one or more hidden layers and an input vector with at least 3n&minu...
Posted by njayashree to PES fitting algorithms math on Mon Aug 04 2008 at 15:09 UTC | info | related
 
Advancing the boundaries of high-connectivity network simulation with distributed computing.
Abigail Morrison et al.
Neural computation 17 (8), 1776-1801 (Aug 2005)
info:pmid/15969917 | info:doi/10.1162/0899766054026648
Posted by btel to distributed computing algorithms neural network modeling on Mon Aug 04 2008 at 10:52 UTC | info | related

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