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DNA shuffling of a family of genes from diverse species accelerates directed evolution
Andreas Crameri et al.
Nature 391 (6664), 288-91 (15 Jan 1998)
Posted by seeree28 and 1 other to shuffling DNA on Wed Jan 07 2009 at 16:38 UTC | info | related
 
Derivatization of DNAs with selenium at 6-position of guanine for function and crystal structure studies
Nucleic Acids Research 36 (22), 7009 (2008)
Posted by ChemGenomics to DNA on Wed Jan 07 2009 at 14:57 UTC | info | related
 
A large-scale survey of genetic copy number variations among Han Chinese residing in Taiwan
BMC Genetics 9 (1), 92 (2008)
Posted by ryan1schmidt to variation Han China DNA on Wed Jan 07 2009 at 06:04 UTC | info | related
 
Accelerated nuclei preparation and methods for analysis of histone modifications in yeast
Methods 40 (4), 296 (2006)
 
Real-Time DNA Sequencing from Single Polymerase Molecules
Science (New York, N.Y.) 323 (5910), 1162986-38 (20 Nov 2008)
 
MicroRNAs control de novo DNA methylation through regulation of transcriptional repressors in mouse embryonic stem cells.
Lasse Sinkkonen et al.
Nature structural & molecular biology 15 (3), 259-67 (Mar 2008)
Posted by yguo to methylation ES miRNA DNA on Sat Dec 27 2008 at 06:04 UTC | info | related
 
De novo DNA methylation promoted by G9a prevents reprogramming of embryonically silenced genes.
Silvina Epsztejn-Litman et al.
Nature structural & molecular biology 15 (11), 1176-83 (Nov 2008)
Posted by yguo to G9a methylation ES DNA on Sat Dec 27 2008 at 06:02 UTC | info | related
 
A Simplified, Noninvasive Stool DNA Test for Colorectal Cancer Detection
Steven Itzkowitz et al.
Am J Gastroenterol 103 (11), 2862-70 (Nov 2008)
Posted by sigoldberg1 to DNA screening on Fri Dec 26 2008 at 23:59 UTC | info | related
 
Cell Host and Microbe - TLR-Independent Type I Interferon Induction in Response to an Extracellular Bacterial Pathogen via Intracellular Recognition of Its DNA
www.cell.com
Type I interferon (IFN) is an important host defense cytokine against intracellular pathogens, mainly viruses. In assessing IFN production in response to group B streptococcus (GBS), we find that IFN- was produced by macrophages upon stimulationwith both heat-killed and live GBS. Exposure of macrophages to heat-killed GBS activated a Toll-like receptor (TLR)-dependent pathway, whereas live GBS activated a TLR/NOD/RIG-like receptor (RLR)-independent pathway. This latter pathway required bacterial phagocytosis, proteolytic bacterial degradation, and phagolysosomal membrane destruction by GBS pore-forming toxins, leading to the release of bacterial DNA into the cytosol. GBS DNA in the cytosol induced IFN- production via a pathway dependent on the activation of the serine-threonine kinase TBK1 and phosphorylation of the transcription factor IRF3. Thus, activation of IFN-/- production during infection with GBS, commonly considered an extracellular pathogen, appears to result from the interaction of GBS DNA with a putative intracellular DNA sensor or receptor.
 
Induction of inflammatory and immune responses by ...[J Exp Med. 2008] - PubMed Result
www.ncbi.nlm.nih.gov
Autoantibodies against double-stranded DNA (dsDNA) and nucleosomes represent a hallmark of systemic lupus erythematosus (SLE). However, the mechanisms involved in breaking the immunological tolerance against these poorly immunogenic nuclear components are not fully understood. Impaired phagocytosis of apoptotic cells with consecutive release of nuclear antigens may contribute to the immune pathogenesis. The architectural chromosomal protein and proinflammatory mediator high mobility group box protein 1 (HMGB1) is tightly attached to the chromatin of apoptotic cells. We demonstrate that HMGB1 remains bound to nucleosomes released from late apoptotic cells in vitro. HMGB1-nucleosome complexes were also detected in plasma from SLE patients. HMGB1-containing nucleosomes from apoptotic cells induced secretion of interleukin (IL) 1beta, IL-6, IL-10, and tumor necrosis factor (TNF) alpha and expression of costimulatory molecules in macrophages and dendritic cells (DC), respectively. Neither HMGB1-free nucleosomes from viable cells nor nucleosomes from apoptotic cells lacking HMGB1 induced cytokine production or DC activation. HMGB1-containing nucleosomes from apoptotic cells induced anti-dsDNA and antihistone IgG responses in a Toll-like receptor (TLR) 2-dependent manner, whereas nucleosomes from living cells did not. In conclusion, HMGB1-nucleosome complexes activate antigen presenting cells and, thereby, may crucially contribute to the pathogenesis of SLE via breaking the immunological tolerance against nucleosomes/dsDNA.

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